| Yazarlar (4) |
Doç. Dr. Esra Nurten YER ÇELİK
Kastamonu Üniversitesi, Türkiye |
Prof. Dr. Mehmet Cengiz BALOĞLU
Kastamonu Üniversitesi, Türkiye |
Prof. Dr. Yasemin ÇELİK ALTUNOĞLU
Kastamonu Üniversitesi, Türkiye |
Prof. Dr. Sezgin AYAN
Kastamonu Üniversitesi, Türkiye |
| Özet |
| Heat shock proteins (Hsps) are a group of proteins found in all living organisms. They play key roles in regulating the stress response to salinity, drought, and extreme temperature changes in plants. Hsps also act as molecular chaperones that provide favorable conditions for the correct folding of other proteins, thus preventing protein aggregation. Many studies have been performed to identify molecular functions of individual family members. However, there is a limited study on genome-wide identification and characterizations of Hsp70s in Fagaceae family (American beech, American chestnut, Chinese chestnut, European chestnut, Japanese chestnut, Oak, Red oak and White oak). In this study, we have identified 13, 17 and 15 Hsp70 genes in beech, oak and chestnut, respectively. Phylogenetic, conserved motifs and 3D protein structure analysis of identified Hsp70 genes were also performed. According to phylogenetic analysis, Hsp70 genes could be classified into different groups. Specific motifs were found in all predicted Hsp70 proteins and were relatively conserved in beech, oak and chestnut genomes. The protein 3D structure of a total of thirteen Hsp70s “(FagHsp70-03 (68%)/FagHsp70-08 (65%)/FagHsp70-09 (71%)/FagHsp70-13 (80%)/QuerHsp70-03 (65%)/QuerHsp70-04 (68%)/QuerHsp70-09 (71%)/QuerHsp70-14 (77%)/CasHsp70-03 (65%)/CasHsp70-04 (67%)/CasHsp70-11 (65%)/CasHsp70-14 (65%)/CasHsp70-15 (61%)” were modelled at> 90% confidence and the percentage residue varied from 65 to 80. These results provide characterization and functional information of Hsp70 proteins for Fagaceae family. This genome … |
| Anahtar Kelimeler |
| Makale Türü | Özgün Makale |
| Makale Alt Türü | Ulusal alan endekslerinde (TR Dizin, ULAKBİM) yayınlanan tam makale |
| Dergi Adı | BIODICON |
| Dergi ISSN | 1308-8084 |
| Dergi Tarandığı Indeksler | AGRICOLA; Bibliotheken; Buscador de Archives; Dayang Journal System; DOAJ-Directory of Open Access Journals; EBSCO Publishings databases; ECSI; Genamics JournalSeek Database; HealthHaven; HKU Scholars Hub.; ICAAP-database; Index Copernicus; InfoBaseIndex; I2OR; Journal Directory, News-of-Science; MNIS; OhioLINK Databases-OPC4-Online-Katalog der Bibliothek der Fachhochschule Anhalt; Online-Katalog der UB Clausthal; Paper Search Engine; ProQest-Central To Rechearch Araund The World; Thomson Reuters; Turkey Citation Index; Ulakbim; Zoological Record. |
| Makale Dili | İngilizce |
| Basım Tarihi | 06-2016 |
| Cilt No | 9 |
| Sayı | 2 |
| Sayfalar | 84 / 91 |
