HSF and Hsp Gene Families in sunflower: a comprehensive genome‑wide determination survey and expression patterns under abiotic stress conditions
Yazarlar (3)
Yusuf Ceylan Kastamonu Üniversitesi, Türkiye
Prof. Dr. Yasemin ÇELİK ALTUNOĞLU Kastamonu Üniversitesi, Türkiye
Erdoğan Horuz Kastamonu Üniversitesi, Türkiye
| Makale Türü |
Özgün Makale
(SSCI, AHCI, SCI, SCI-Exp dergilerinde yayınlanan tam makale)
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| Dergi Adı | Protoplasma (Q2) | ||
| Dergi ISSN | 0033-183X Wos Dergi Scopus Dergi | ||
| Dergi Tarandığı Indeksler | SCI-Expanded | ||
| Makale Dili | İngilizce | Basım Tarihi | 01-2023 |
| Kabul Tarihi | 24-04-2023 | Yayınlanma Tarihi | 08-05-2023 |
| Cilt / Sayı / Sayfa | 260 / 6 / 1473–1491 | DOI | 10.1007/s00709-023-01862-6 |
| Makale Linki | https://link.springer.com/article/10.1007/s00709-023-01862-6 | ||
| Özet |
| Sunflowers belong to the Asteraceae family, which comprises nutrimental and economic oilseed plants. Heat shock proteins (Hsps) are protein families vital for all organisms’ growth and survival. Besides the ordinary conditions, the expression of these proteins ascends during abiotic stress factors such as high temperature, salinity, and drought. Using bioinformatics approaches, the current study identified and analyzed HSF and Hsp gene family members in the sunflower (Helianthus annuus L.) plant. HSF, sHsp, Hsp40, Hsp60, Hsp70, Hsp90, and Hsp100 domains were analyzed in the sunflower genome, and 88, 72, 192, 52, 85, 49, and 148 genes were identified, respectively. The motif structures of the proteins in the same phylogenetic tree were similar, and the α-helical form was dominant in all the protein families except for sHsp. The estimated three-dimensional structure of 28 sHsp proteins was determined as … |
| Anahtar Kelimeler |
| Bioinformatics analysis | Gene expression | Genome-wide determination | Helianthus annuus L | HSF (Heat shock factors) | Hsp (Heat shock proteins) |
BM Sürdürülebilir Kalkınma Amaçları
| Atıf Sayıları | |
| Web of Science | 15 |
| Scopus | 16 |
| Google Scholar | 20 |