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Akademisyenler > Fatemeh MOLLAAMIN > Yayın Detayı

BNB-BnNn Nano-Motor in Binding with ACC (tRNA) Nucleotides as an Amino Acid Detector in Ribosome: QM/MM & Monte Carlo Studies   
Yazarlar (2)
Majid Monajjemi
Islamic Azad University, Central Tehran Branch, İran
Dr. Öğr. Üyesi Fatemeh MOLLAAMIN Dr. Öğr. Üyesi Fatemeh MOLLAAMIN
Kastamonu University, Türkiye
Devamını Göster
Özet
The electromagnetic non-bonded interactions of BNB molecule inside the BnNn (such as B12N12, B15N15, and B18N18) ring as a detector for tRNA-Amino acid conjugation has been investigated by QM/MM & Monte Carlo methods. In this study, we have shown that the BNB-BnNn systems can work as a nano rotor-stator for detecting tRNA during the tRNA-Amino-acid conjugation. We have employed the B12N12-tRNA (glu), B12N12--tRNA(phe) and B12N12-BNB-tRNA(arg) systems coupled with BN (-, 0, +) B inside the B12N12 ring (as a rotor) (n=12, 15, 18). We have shown that the tRNA as an extrinsic factor (stator) is set in the BNB-B12N12 system due to the generation of radical, anion, and cation forms of BN(-,0,+)B. We have also calculated the tRNA-BNB-B12N12 and obtained quantized transitional frequencies among the forms of radical, anionic, and cationic. The three frequencies have been yielded as νr-c) 486948.498 GHz, νa-c) 1792900.812 GHz, and νr-a) 2507076.816 GHz. It can be seen that all observed frequencies appeared in the IR and macro wave regions.
Anahtar Kelimeler
BnNn ring | Monte Carlo | ribosome | tRNA
Makale Türü Özgün Makale
Makale Alt Türü SCOPUS dergilerinde yayınlanan tam makale
Dergi Adı Biointerface Research in Applied Chemistry
Dergi ISSN 2069-5837 Wos Dergi Scopus Dergi
Makale Dili İngilizce
Basım Tarihi 06-2023
Cilt No 13
Sayı 3
Doi Numarası 10.33263/BRIAC133.254
Atıf Sayıları
SCOPUS 1
BNB-BnNn Nano-Motor in Binding with ACC (tRNA) Nucleotides as an Amino Acid Detector in Ribosome: QM/MM & Monte Carlo Studies

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