Comparative Phylogeography of Tree Species in the Hyrcanian Forests, Iran by Genome-wide SNPs
Yazarlar (6)
Mohammad Vatanparast
Palle Madsen
Khosro Sagheb-Talebi
Jørgen Bo Larsen
Prof. Dr. Sezgin AYAN Kastamonu Üniversitesi, Türkiye
Ole K Hansen Kastamonu Üniversitesi
| Makale Türü | Özgün Makale (Uluslararası alan indekslerindeki dergilerde yayınlanan tam makale) | ||
| Dergi Adı | bioRxiv | ||
| Makale Dili | – | Basım Tarihi | 08-2023 |
| Cilt / Sayı / Sayfa | 0 / 0 / 2023–8 | DOI | 10.1101/2023.08.25.554899.abstract |
| Makale Linki | https://www.biorxiv.org/content/10.1101/2023.08.25.554899.abstract | ||
| UAK Araştırma Alanları |
Silvikültür
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| Özet |
| The Hyrcanian forests in Iran are one of the last remaining natural deciduous forests in the world and a UNESCO World Heritage site. We investigated the population genetics of representative indigenous tree species, Acer velutinum Boiss., Fagus orientalis Lipsky, and Quercus castaneifolia C.A. Mey. in northern Iran and also F. orientalis populations in the Euro-Siberian and Colchic sub-regions in northern Türkiye. We used the double-digest RAD-seq method and genotyped 90 populations and 1,589 individuals across the distribution range of the species. Our analyses yielded 1,347, 2,091, and 8,881 genome-wide SNPs from 28 populations of A. velutinum, 32 populations of F. orientalis, and 30 Q. castaneifolia, respectively. Our results revealed higher genetic differentiations among A. velutinum populations than those of F. orientalis and Q. castaneifolia within the Hyrcanian forests. The global FST value was lowest for F. orientalis populations (0.019) and highest for A. velutinum populations (0.12), while the FIS value was negative for A. velutinum (–0.095). Demographic history analysis indicated a bottleneck during the last glacial maximum for the A. velutinum populations with reduced effective population size. The three species showed evidence of population bottlenecks during the Pliocene. Our findings highlight the pronounced genetic divergence among A. velutinum populations in the Hyrcanian forests compared to the other two species, suggesting cryptic speciation. Conversely, F. orientalis and Q. castaneifolia populations demonstrated a reduced level of genetic structure, indicating that species-specific factors, such as pollen production … |
| Anahtar Kelimeler |
BM Sürdürülebilir Kalkınma Amaçları
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| Google Scholar | 1 |